#UCSC genome version used for the eight primate species

Human		    hg38
Chimpanzee	    panTro5
Gorilla		    gorGor4
Orangutan	    ponAbe2
Rhesus		    rheMac8
Crab-eating_macaque macFas5
Baboon		    papAnu2
Green_monkey	    chlSab2


#SS-MEs for each of the 8 primate genomes were provided in fasta entries with the defline containing the following columns 
(header: ID|Type|Position|strand|Subfamily|Class|family|Fragment_count|length|chrSs|chrEs|cons_len|conSts|conEs|conLeft|TSD|TSD_length|5TSD|3TSD|Pre_motif|5TR|5TR_len|3TR|3TR_len|RIMD|RIMD_len)

#sequences for each entry are presented in 9 lines in the following order, an empty line indicates the value being null:
5' flanking
5' TSD
5' TR
5' RMID
ME
3' RMID
3' TR
3' TSD
3' flanking

#sample entry:
>04302600|Class I|chrX:69370469-69370771|-|AluYh3|SINE|Alu|1|302|69370469|69370771|311|302|1|-9|AAGAAATTTA|10|AAGAAATTTA|AAGAAATTTA|TGAGTGATATAGAATAAGAAATTTATTATG|NA|0|NA|0|NA|0
aaacccctactgtagtcatactgattaaatggcatttactggacactgtatctgttagagtgtgatcagagaagcagagccactgtgagtgatatagaat
AAGAAATTTA

ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggcagaggcgggcggatcatgaggtcaggagatcgagaccatcctggctaacacaatgaaaccccgcctctactaaaaatacaaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaa

AAGAAATTTA
ttatgggaattataattttcaccatattgggagctgataaagaaacctacggaagggtgtggcctctacatctagtggtgggactgaagtggctaaagga
>00207176|Class I|chr1:121355305-121355608|-|AluYc|SINE|Alu|1|303|121355305|121355608|299|299|1|0|AAAAGAATGTGTATCT|16|AAAAGAATGTGTATCT|AAAAGAATGTGTATCT|TTCCACGTACACTTGAAAAGAATGTGTATC|NA|0|NA|0|NA|0
atggagatttccaatctccagctctaatttctcccctaagctcttcgatttttcctccccatttcaggtttaaactttgtaaatgttccacgtacacttg
AAAAGAATGTGTATCT

ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccaaggtgaaaccccgtctctactaaaaatacaaaaaaaaagttagccgggcgtagtggcgggcacctgtagtcccagctattcaggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccaagatcgcgccactgcactccagcctgggtgacagagcgaaactccgtctcaaaaaaaaaaaaaaaaaaaaaaaaaa

AAAAGAATGTGTATCT
acccgcagttgtcaggcgcagtatccatatatgtcatttaggtcaagtttgttgtatttttactgacttttttggtctagttgtttaatcattcactgag